Neuse River
Stratification Project


Background

The dramatic fish kills that occurred during 1995 in the Neuse River estuary have been closely linked to low levels of dissolved oxygen in the water column. This condition was caused by the decay of excessive algal blooms in the river (a process that consumes oxygen) combined with the presence of stratification (a layer of fresher, less dense water overlying saltier, denser water) that isolated the lower part of the water column and restricted the replenishment of oxygen from the atmosphere. In the short term, reducing nutrient inputs into the Neuse will likely minimize the severity of future algal blooms. However, if we are to effectively manage this system into the next century, a quantitative understanding of the system must be developed. This understanding will be the foundation for predicting the behavior of the critical processes controlling water quality in the river. Understanding the circulation in the system is fundamental to any such effort since the hydrodynamics are responsible for delivering and distributing nutrients and algae, and ultimately flushing these materials, from the river system.

The Neuse River is located near New Bern, North Carolina, and has been the site of several recent fish kills.



Project Members

o Dr. Francisco E. Werner, UNC-CH, Department of Marine Sciences
o Dr. Rick Luettich, UNC-CH, Institute of Marine Sciences, Morehead City, NC.
o Brian O. Blanton, UNC-CH, Department of Marine Sciences
o John A. Quinlan, UNC-CH, Department of Marine Sciences


The stratification of the Neuse River is a function of several physical variables which include up-river fresh-water discharge and duration of weak wind periods. These two parameters are the focus of the current stratification project and are being investigated by using a state-of-the-art 3-dimensional prognostic Finite Element model that solves the relevant hydrodynamic equations in Shallow-Water Wave Equation form and incorporates heat and salt transport and turbulence closure in tidal time. This numerical model was (and is being) developed by Drs. D.R. Lynch, C.E. Naimie, and J.T.C. Ip, at Numerical Methods Laboratory, Thayer School of Engineering, Dartmouth College, and Dr. F.E. Werner here at OPNML, UNC-CH.

Simulation Domain


This implementation of the Finite Element Method involves representing the geographic region of the water body of interest (the "domain") as discrete points joined together in a matrix of triangles (or "elements"), called a "mesh". The computer then solves the equations of motion governing fluid flow and calculates results (e.g., sea surface level, water velocity, salinity concentration, temperature distribution) at each intersection (or triangle vertex) in the grid. A major benefit of using the Finite Element Method is the ability to describe the domain with triangles of irregular spacing. This allows the concentration of computational effort in particluar regions of interest and/or in regions where the dynamics of the flow are likely to be quite complicated. This "concentration" appears as regions where the element vertices are close together (i.e., the mesh appears black) Notice that our model is able to simulate both the exchange of water between the sounds and the coastal ocean and the details of the circulation in the Neuse River Estuary.

The Neuse River model mesh, shown within the red boundary in the following images, is actually a section of a larger mesh encompassing Albemarle and Pamlico Sounds and the associated continental shelf sea. The computational domain (mesh) is shown on the left, and the bathymetries (depths) are on the right.
Albemarle-Pamlico
Sounds with High
Resolution Neuse
River Mesh
System Bathymetries

Simulation Parameters


Length: 15 days
Forcing:
o River discharge: Water with salinity of 10 PSU is discharged at 100 cubic meters per second into ambient water with no momentum and 32 PSU salinity. The discharge location is indicated by the red dot on the model mesh image above and lasts for the duration of the simulation.
o Wind: A wind blowing about 20 knots from Northeast to Southwest is "turned on" at the start of day 7 and "turned off" at the start of day 10.

Results


The first set of images shows the development of stratification and movement of the lighter, fresher water down river. Each image represents the instantaneous distribution of salinity at the END of days 1, 3, 5, 7, 9, 11, 13, and 15. The x-axis is distance downstream in kilometers from the discharge location, and the y-axis is depth below the river water surface in meters. This transect is made up of 4 sections that approximately follow the bends in the river; these sections are the red lines on the Neuse River "model mesh" close-up image above.

Note the following:
o In this sequence of images, the saltier, heavier water is represented by red and the fresher, lighter water, the river discharge, is represented by blue. Intermediate colors represent the result of mixing processes that act to homogenize the waters of different characteristics. The strength of vertical mixing is a function of differences in vertical velocity, called shear.
o Through day 7, the water is stratified, evidenced by the discrete color bands that overlay each other in the horizontal. Between day 7 and day 9, the imposed wind stress adds momentum to the system, increasing the vertical shear, and consequently the vertical mixing. The water column becomes well-mixed, evidenced by the color bands being oriented vertically, instead of horizontally as was the case previous to the application of the wind. Note the end of Day 9.
o The winds are "turned off" after day 9 and the system starts to return to a stratified state, particularly in the lower end of the river (15-20 kilometers down stream).

Animations

Below is an animation of the above sequences, with better resolution in time. In this animation, the timing of the application of the model forcings (buoyancy discharge and winds) is shown in the lower right.

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for a 1. Mb .FLC

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Maintained by: Brian Blanton
TO : blanton@marine.unc.edu