OPNML Publications
Papers -
Reviewed
Edwards
et al. (2006)
Edwards, K. P., J. A. Hare, F. E. Werner and B. O. Blanton.
Lagrangian circulation on the Southeast U.S. Continental shelf:
implications for larval dispersal and retention.
Continental Shelf Research,
accepted, pp. 49.
Edwards et al. (2006)
Edwards, K. P., F. E. Werner and B. O.
Blanton.
Comparison of observed and modeled drifters in coastal regions:
an
improvement through adjustments for observed drifter slip and errors in
wind fields.
Journal of Atmospheric and Oceanic
Technology, pp. 20.
Lough et
al. (2005)
Lough, R.G., L.J. Buckley, F.E.
Werner, J.A. Quinlan and K.P.
Edwards
A general biophysical model of larval Atlantic cod (Gadus
morhua) growth applied to populations on Georges Bank
Fish. Oceanogr., 14:4, 241-262.
Redfern et al. (2005)
Redfern, J.V., M.C. Ferguson, E.A. Becker, K.D. Hyrenbach, C.
Good, J. Barlow, K. Kaschner, M.F. Baumgartner, K.A. Forney, L.T.
Ballance, P. Fauchald, P. Halpin, T. Hamazaki, A.J. Pershing, S.S.
Qian, A. Read, S.B. Reilly, L. Torres and F. Werner (2005).
Techniques for Cetacean-Habitat Modeling: A Review.
Marine Ecological Progress Series,
accepted.
Lehodey et al. (2005)
Lehodey, P., J. Alheit, M. Barange, T. Baumgartner, G.
Beaugrand, K. Drinkwater, J-M. Fromentin, S. Hare, G. Ottersen, R. I.
Perry, C. Roy, C.D. van der Lingen and F.
Werner (2005)
Climate variability, fish and fisheries.
J. Climate, in press.
Kishi et al. (2005)
Kishi M. J., D. L. Eslinger , M. Kashiwai, B.A. Megrey, D.M.
Ware, F.E. Werner, M.
Aita-Noguchi, T. Azumaya, M. Fujii, S. Hashimoto, H. Iizumi, Y. Ishida,
S. Kang, G.A. Kantakov, H. Kim, K. Komatsu, V. V. Navrotsky, L. S.
Smith, K. Tdokoro, A. Tsuda, O. Yamamura, Y. Yamanaka, K. Yokouchi, N.
Yoshie, J. Zhang, Y. I. Zuenko, V. I. Zvalinsky (2005)
NEMURO - Introduction to a lower trophic level model for the North
Pacific marine ecosystem.
Ecological Modelling special issue on
coupled LTL-HTL models. Accepted.
Rose
et al. (2005)
Rose, K.A. F.E. Werner,
Hay D.E., R.A. Klumb, B.A. Megrey, D.W. Ware and Y. Yamanaka (2005)
Latitudinal differences in herring growth response to climatic
variability.
Ecological Modelling special issue on
coupled LTL-HTL models. Accepted.
Megrey et al. (2005)
Megrey B. A., K. A. Rose, R. Klumb, D. Hay, F. E. Werner, D. L. Eslinger and L.
Smith (2005)
A bioenergetics population dynamics model of Pacific herring (Clupea
pallasii) coupled to NEMURO: Dynamics, description, validation and
sensitivity analysis.
Ecological Modelling special issue on
coupled LTL-HTL models. Accepted.
Rose et al. (2005)
Rose, K.A., Megrey, B.A,. Hay, D., Werner,
F., Schweigert, J. (2005)
Climate regime effects on Pacific herring growth using coupled
nutrient-phytoplankton-zooplankton and bioenergetics models.
Trans. Am. Fish. Soc.,
Accepted.
Aretxabaleta
et al.(2004)
Aretxabaleta,A., J. Manning, F. E.
Werner, K. Smith, B. Blanton,
and D.
R. Lynch,
Data Assimilative Hindcasting on the
Southern Flank of
Georges Bank during May 1999:
Frontal Circulation and Implications,
Cont. Shelf Res. 25 (7/8), 849-874.
Blanton
et al.(2004)
Blanton, B. O., F. E.
Werner, H. E. Seim, R. A. Luettich,
D. R. Lynch, K. W. Smith,
G. Voulgaris, F. M. Bingham, and F. Way
Barotropic tides in the South Atlantic
Bight.
J. Geophys. Res., 109, C12024,
doi: 10/1029/2004JC002455, 2004.
deYoung et al. (2004)
deYoung, B., M. Heath, F.
Werner, F. Chai, B. Megrey and P. Monfray,
Challenges of Modeling Ocean Basin Ecosystems.
Science 304: 1463-1466. 2004.
Supplementary
information
Lynch
et al. (2004)
Lynch, D., K. Smith, B. Blanton,
R. Luettich and F. Werner,
Forecasting the Coastal Ocean: Resolution, Tide, and Operational Data
in the South Atlantic Bight.
J. Atmos. Ocean. Tech. 21:
1074-1085, 2004.
Runge et al. (2004)
Runge, J.A., P.J.S. Franks, W.C. Gentleman, B.A. Megrey, K.A.
Rose,
F.E. Werner, and B. Zakardjian,
Diagnoses and prediction of variability in secondary production and
fish recruitment processes: developments in physical-biological
modeling.
Chapter 14, In : Robinson, A.R. and K.H. Brink (eds). Global Coastal
Ocean: Multi-Scale Interdisciplinary Processes, The Sea, Vol. 13,
Harvard University Press, 2004.
Werner et al.(2004)
Werner, F. E., A. Aretxabaleta,
and K.Pehrson Edwards,
Modelling marine ecosystems and their environmental forcing.
In Marine Ecosystems and Climate
Variation, (eds. ) N. C. Stenseth, G. Ottersen, J. W. Hurrell
and A. Belgrano, 33–47, Oxford University Press, 2004.
Blanton et al.
(2003)
An edited version of this
paper was published by AGU. Copyright 2003 American Geophysical Union.
Blanton,
B. O., A. Aretxabaleta, F. E. Werner, and H. E.
Seim,
Monthly climatology of the continental shelf waters of the
South
Atlantic Bight,
J. Geophys. Res., 108(C8),
3264, doi:10.1029/2002JC001609, 2003
Seim et al. (2003)
Seim, H., B. Bacon, C. Barans, M. Fletcher, K. Gates, R. Jahnke,
E.
Kearns, R. Lea, M. Luther, C. Mooers, J. Nelson, D. Porter, L. Shay, M.
Spranger, J. Thigpen, R. Weisberg, F.
Werner
SEA-COOS – A Model for a Multi-State, Multi-Institutional Regional
Observation System
MTS Journal, 37(3), 92-101,
2003.
Werner and Quinlan (2002)
Werner, F.E. and J.A. Quinlan,
Fluctuations in marine fish populations: physical processes and
numerical modeling.
ICES Marine Science Symposia,
215: 264-278, 2002.
Hench et al. (2002)
Hench, J. L., B. O.
Blanton, and R. A. Luettich,
Lateral dynamic analysis and classification of barotropic tidal inlets,
Cont. Shelf Res., 22,
2615-2631, 2002
Werner et al. (2001)
Werner, F.E., J.A. Quinlan, R. G. Lough and D.R. Lynch,
Spatially-Explicit Individual Based Modeling of Marine Populations: A
Review of the Advances in the 1990’s.
Sarsia 86: 411-421, 2001.
Werner and Blanton (2001)
Werner, F. E., and B. O.
Blanton,
Coastal ocean models,
in Encyclopedia of Ocean
Science,
edited by T. Steele and Thorpe, pp. 472-480, Harcourt Press, 2001.
Werner et al. (2001)
Werner, F.E., B.R. Mackenzie, R.I. Perry, R.G. Lough, C.E.
Naimie, B.O.
Blanton, and J.A. Quinlan,
Larval trophodynamics, turbulence, and drift on Georges Bank: A
sensitivity analysis of cod and haddock.
Sci. Mar., 63 (Suppl. 1):
99-115, 2001.
Blanton
et al. (1999)
Blanton, J.O., F.E. Werner,
A. Kapolnai, B.O. Blanton, D.
Knott, and
E.L. Wenner,
Wind-generated transport of fictitious passive larvae into
shallow tidal estuaries.
Fish. Oceanogr. 8 (Suppl.
2): 210-223.
Checkley et al. (1999)
Checkley Jr., D.M., P.B. Ortner, F.E. Werner, L.R. Settle and S.R.
Cummings,
Spawning habitat of the Atlantic menhaden in Onslow Bay, North
Carolina.
Fish. Oceanogr. 8 (Suppl.
2): 22-36.
Hare
et al. (1999)
Hare, J.A., J.A. Quinlan,
F.E. Werner, B.O. Blanton, J.J. Govoni, R.B.
Forward, L.R. Settle and D.E. Hoss,
Larval transport during winter in the SABRE study area: results of a
coupled vertical larval behaviour-three-dimensional circulation model.
Fish. Oceanogr. 8 (Suppl.
2): 57-76.
Luettich et al. (1999)
Luettich Jr., R.A., J.L. Hench, C.W. Fulcher, F.E. Werner, B.O.
Blanton, J.H. Churchill,
Barotropic tidal and wind-driven larval
transport in the vicinity of a barrier island inlet.
Fish. Oceanogr. 8 (Suppl.
2): 190-209.
Quinlan
et al. (1999)
Quinlan, J.A., B.O. Blanton,
T.J. Miller and F.E. Werner,
From spawning grounds to the estuary: using linked individual-based and
hydrodynamic models to interpret patterns and processes in the oceanic
phase of Atlantic menhaden Brevoortia tyrannus life history.
Fish. Oceanogr. 8 (Suppl.
2): 224-246.
Stegmann et al. (1999)
Stegmann, P.M., J.A. Quinlan,
F.E. Werner, B.O. Blanton, and P.
Berrien,
Atlantic menhaden recruitment to a southern estuary: defining potential
spawning regions.
Fish. Oceanogr. 8 (Suppl.
2): 111-123.
Werner et al. (1999)
Werner, F.E., B.O. Blanton,
J.A. Quinlan and R.A. Luettich,
Jr.,
Physical oceanography of the North Carolina continental shelf during
the fall and winter seasons: implications for the transport of larval
menhaden.
Fish. Oceanogr. 8 (Suppl.
2): 7-21.
Werner
et al. (1997)
Werner, F.E., J.A. Quinlan,
B.O. Blanton and R.A. Luettich
Jr,
The role of hydrodynamics in explaining variability in fish
populations.
J. Sea Res. 37:
195-212.
Werner et al. (1993)
Werner, F.E., F.H. Page, D.R. Lynch, J.W. Loder, R.G. Lough,
R.I.
Perry, D.A. Greenberg and M.M. Sinclair,
Influences of mean advection and simple behavior on the distribution of
cod and haddock early life stages on Georges Bank.
Fish. Oceanogr. 2:2, 43-64.
Conference Proceedings
Runge et al. (2000)
Runge, J., J. Quinlan,
E. Durbin, F. Werner, G.
Lough, L. Buckley, E.
Caldarone, L. Incze, J. Manning, D. Mountain, B. Niehoff, S. Plourde
The effect of spatial and temporal variation in zooplankton
concentrations on larval cod growth and survival on Georges Bank: a
sensitivity analysis based on modeling and observations,
2000 ICES Annual Science
Conference, 88th Statutory Meeting
27-30 September 2000, Brugge, Belgium
Werner et al. (2000)
Werner, F.E., R.G. Lough, J.A. Quinlan, L.J. Buckley, E.
Durbin, L.S.
Incze, J.A. Runge
Modeling growth of larval cod and haddock on Georges Bank: a synthesis
of observations and model results for Spring 1995
2000 ICES Annual Science
Conference, 88th Statutory Meeting
27-30 September 2000, Brugge, Belgium
Conference Abstracts, Posters and Presentations
Other Presentations
Internal Reports
Aretxabaleta
(2003)
PhD Dissertation: Baroclinic Processes in Coastal Oceans: Observations
and Modeling on Georges Bank and the South Atlantic Bight Continental
Shelf
Blanton (2003)
PhD Dissertation - Towards Operational Modeling in the South Atlantic
Bight
Particle tracking manuals
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